Results for 'James A. Moore'

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  1. Just consequentialism and computing.James H. Moor - 1999 - Ethics and Information Technology 1 (1):61-65.
    Computer and information ethics, as well as other fields of applied ethics, need ethical theories which coherently unify deontological and consequentialist aspects of ethical analysis. The proposed theory of just consequentialism emphasizes consequences of policies within the constraints of justice. This makes just consequentialism a practical and theoretically sound approach to ethical problems of computer and information ethics.
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  2. Reason Dethroned; Knowledge Regained.James Arthur Moore - 1991 - Dissertation, University of Pittsburgh
    Hume held that we have no rational justification for our inductive beliefs. A more radical view is that we have no rational justification for any of our beliefs. This dissertation has two goals pertaining to this more radical view. // The first goal is to find a basis for constructive epistemology that is consistent with this view. This goal is first sought by considering externalist theories of knowledge since these do not require rational justification for knowledge. Externalist theories are defended (...)
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  3. (1 other version)Ineffability and nonsense.Adrian W. Moore - 2003 - Aristotelian Society Supplementary Volume 77 (1):169–193.
    [A. W. Moore] Criteria of ineffability are presented which, it is claimed, preclude the possibility of truths that are ineffable, but not the possibility of other things that are ineffable—not even the possibility of other things that are non-trivially ineffable. Specifically, they do not preclude the possibility of states of understanding that are ineffable. This, it is argued, allows for a reappraisal of the dispute between those who adopt a traditional reading of Wittgenstein’s Tractatus and those who adopt the (...)
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  4. Self-Knowledge Requirements and Moore's Paradox.David James Barnett - 2021 - Philosophical Review 130 (2):227-262.
    Is self-knowledge a requirement of rationality, like consistency, or means-ends coherence? Many claim so, citing the evident impropriety of asserting, and the alleged irrationality of believing, Moore-paradoxical propositions of the form < p, but I don't believe that p>. If there were nothing irrational about failing to know one's own beliefs, they claim, then there would be nothing irrational about Moore-paradoxical assertions or beliefs. This article considers a few ways the data surrounding Moore's paradox might be marshaled (...)
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  5. Cogito and Moore.David James Barnett - 2023 - Synthese 202 (1):1-27.
    Self-verifying judgments like _I exist_ seem rational, and self-defeating ones like _It will rain, but I don’t believe it will rain_ seem irrational_._ But one’s evidence might support a self-defeating judgment, and fail to support a self-verifying one. This paper explains how it can be rational to defy one’s evidence if judgment is construed as a mental performance or act, akin to inner assertion. The explanation comes at significant cost, however. Instead of causing or constituting beliefs, judgments turn out to (...)
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  6. MacIntyre and the Emotivists.James Edwin Mahon - 2013 - In Fran O'Rourke (ed.), What Happened in and to Moral Philosophy in the Twentieth Century?: Philosophical Essays in Honor of Alasdair Macintyre. Notre Dame: University of Notre Dame Press.
    This chapter both explains the origins of emotivism in C. K. Ogden and I. A. Richards, R. B. Braithwaite, Austin Duncan-Jones, A. J. Ayer and Charles Stevenson (along with the endorsement by Frank P. Ramsey, and the summary of C. D. Broad), and looks at MacIntyre's criticisms of emotivism as the inevitable result of Moore's attack on naturalistic ethics and his ushering in the fact/value, which was a historical product of the Enlightenment.
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  7. Inferential Justification and the Transparency of Belief.David James Barnett - 2016 - Noûs 50 (1):184-212.
    This paper critically examines currently influential transparency accounts of our knowledge of our own beliefs that say that self-ascriptions of belief typically are arrived at by “looking outward” onto the world. For example, one version of the transparency account says that one self-ascribes beliefs via an inference from a premise to the conclusion that one believes that premise. This rule of inference reliably yields accurate self-ascriptions because you cannot infer a conclusion from a premise without believing the premise, and so (...)
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  8. Jim Moor: making a difference 2003.John Sullins - 2009 - Acm Sigcas Computers and Society 39 (2):20-21.
    An interview with The philosopher James Moore on the occasion of his ACM Making a Difference Award, in 2003.
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  9.  83
    A demonstration of intransitivity in natural categories.James A. Hampton - 1982 - Cognition 12 (2):151-164.
    Two experiments are reported which demonstrated intransitivity in category judgments, thus challenging a widely held assumption that the relation between categorized sets is one of class inclusion. Subjects consistently accepted the truth of certain category statements, in spite of being aware of the existence of counterexamples. Implications for semantic memory theory are discussed.
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  10. A Leibniz-Informed Approach to Nietzsche’s Drive Psychology.James A. Mollison - 2023 - Journal of Nietzsche Studies 54 (2):177-202.
    Despite drives’ importance for Nietzsche’s explanation of individuals’ values, controversies persist over how to interpret Nietzsche’s attribution of normative capacities to the drives themselves. On one reading, drives evaluate their aims and recognize the normative authority of other drives’ aims. On another, drives’ normative properties reduce to nonnormative, causal properties. Neither approach is satisfying. The former commits Nietzsche to the homuncular fallacy by granting drives complex cognitive capacities. The latter reading either commits Nietzsche to the naturalistic fallacy, having him derive (...)
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  11. “An unreserved yea‐saying even to suffering”: A skeptical defense of Nietzschean life affirmation.James A. Mollison - 2024 - Southern Journal of Philosophy 62 (2):231-245.
    After examining the problem that gratuitous suffering poses for Nietzsche's notion of life affirmation, I mount a skeptical response to this problem on Nietzsche's behalf. I then consider an orthogonal objection to Nietzschean life affirmation, which argues that the need to justify life is symptomatic of life denial and show how strengthening the skeptical defense sidesteps this worry. Nietzsche's skepticism about our all‐too‐human, epistemic position thus aids his project of life affirmation in two ways. First, it suggests that we are (...)
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  12. Anselm on Freedom and Grace.James A. Gibson - 2014 - Oxford Studies in Philosophy of Religion 5:88-121.
    The chapter presents Anselm’s incompatibilist account of human freedom within the context of his theodicy and presents two arguments against his account. Both arguments aim to show there is a genuine conflict between his account of freedom and the role of God’s grace in making agents just. The first argument, the problem of harmonization, highlights the conflict within the soteriological context where an agent changes from being unjust to being just. The second argument, the problem of just creation, highlights the (...)
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  13. Nietzsche contra Stoicism: Naturalism and Value, Suffering and Amor Fati.James A. Mollison - 2019 - Inquiry: An Interdisciplinary Journal of Philosophy 62 (1):93-115.
    Nietzsche criticizes Stoicism for overstating the significance of its ethical ideal of rational self-sufficiency and for undervaluing pain and passion when pursuing an unconditional acceptance of fate. Apparent affinities between Stoicism and Nietzsche’s philosophy, especially his celebration of self-mastery and his pursuit of amor fati, lead some scholars to conclude that Nietzsche cannot advance these criticisms without contradicting himself. In this article, I narrow the target and scope of Nietzsche’s complaints against Stoicism before showing how they follow from his other (...)
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  14. Meta-metaphysics, constructivism, and psychology as queen of the sciences.James A. Mollison - 2024 - Asian Journal of Philosophy 3 (1):1-10.
    Remhof contends that Nietzsche is a metaphysician. According to his Meta-Metaphysical Argument, Nietzsche’s texts satisfy the criteria for an adequate conception of metaphysics. According to his Constructivist Argument, Nietzsche adopts a metaphysical position on which concepts’ application conditions constitute the identity conditions of their objects. This article critically appraises these arguments. I maintain that the criteria advanced in the Meta-Metaphysical Argument are collectively insufficient for delineating metaphysics as a distinct field of inquiry and that the Constructivist Argument attributes a position (...)
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  15. Barbara McClintock, 1902‐1992.James A. Shapiro - 1992 - Bioessays 14 (11):791-792.
    An appreciation of the life and word of Barbara McClintock, with special emphasis on what made her a unique and visionary scientist. The obituary indicates unappreciated aspects of her work on biological sensing and how organisms restructure their genomes in response to challenges.
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  16. Against Focusing on the Internal Conditions of Nietzschean Greatness.James A. Mollison - 2023 - Journal of Nietzsche Studies 54 (1):76-101.
    After reconstructing three arguments for Nietzsche’s descriptive analysis of the self as complex, this article clarifies some of greatness’s psychological conditions. It then offers three arguments for why we should not focus on these internal conditions when seeking to verify or to achieve greatness. First, Nietzsche’s descriptive analysis of the self renders introspection too coarse-grained and error-prone to verify the subtle type of unity required for greatness. Second, Nietzsche associates introspective appraisal of one’s psyche with a moral project that weakens (...)
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  17. Concepts and Correct Thinking.James A. Hampton - 1989 - Mind and Language 4 (1-2):35-42.
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  18. Similarity-based categorization and fuzziness of natural categories.James A. Hampton - 1998 - Cognition 65 (2-3):137-165.
    The adequacy of similarity to prototype as an account of categorization in natural concepts was assessed by analyzing the monotonicity of the relation between typicality of an item in a category and the probability of a positive categorization response using data from McCloskey and Glucksberg (1978). The analysis revealed a strong underlying similarity-based threshold curve, with systematic deviations. Further data collection showed that deviations from the curve could be attributed to the effects of unfamiliarity and non-categorial associations on typicality judgments, (...)
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  19.  57
    Investigating Differences in People's Concept Representations.James A. Hampton - 2020 - In Teresa Marques & Åsa Wikforss (eds.), Shifting Concepts: The Philosophy and Psychology of Conceptual Variability. Oxford: Oxford University Press.
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  20. Conjunctions of social categories considered from different points of view.James A. Hampton, Margaret Dillane, Laura Oren & Louise Worgan - 2011 - Anthropology and Philosophy 10:31-57.
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  21. Semantic pathology and the open pair.James A. Woodbridge & Bradley Armour-Garb - 2005 - Philosophy and Phenomenological Research 71 (3):695–703.
    In Vagueness and Contradiction (2001), Roy Sorensen defends and extends his epistemic account of vagueness. In the process, he appeals to connections between vagueness and semantic paradox. These appeals come mainly in Chapter 11, where Sorensen offers a solution to what he calls the no-no paradox—a “neglected cousin” of the more famous liar—and attempts to use this solution as a precedent for an epistemic account of the sorites paradox. This strategy is problematic for Sorensen’s project, however, since, as we establish, (...)
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  22. The modifier effect and property mutability.James A. Hampton, Alessia Passanisi & Martin Jönsson - 2011 - Journal of Memory and Language 64:233-248.
    The modifier effect is the reduction in perceived likelihood of a generic property sentence, when the head noun is modified. We investigated the prediction that the modifier effect would be stronger for mutable than for central properties, without finding evidence for this predicted interaction over the course of five experiments. However Experiment 6, which provided a brief context for the modified concepts to lend them greater credibility, did reveal the predicted interaction. It is argued that the modifier effect arises primarily (...)
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  23.  84
    Women, Fire, and Dangerous Things.James A. Hampton - 1989 - Mind and Language 4 (1-2):130-137.
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  24. Genome Informatics: The Role of DNA in Cellular Computations.James A. Shapiro - 2006 - Biological Theory 1 (3):288-301.
    Cells are cognitive entities possessing great computational power. DNA serves as a multivalent information storage medium for these computations at various time scales. Information is stored in sequences, epigenetic modifications, and rapidly changing nucleoprotein complexes. Because DNA must operate through complexes formed with other molecules in the cell, genome functions are inherently interactive and involve two-way communication with various cellular compartments. Both coding sequences and repetitive sequences contribute to the hierarchical systemic organization of the genome. By virtue of nucleoprotein complexes, (...)
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  25. How do people use and appraise concepts?James A. Hampton (ed.) - forthcoming - Switzerland: Springer Nature.
    To approach the many challenges involved in the notion of engineering concepts, it is important to have a clear idea of the starting point – the concepts that people use in their everyday lives, in conversations and in expressing beliefs, desires, intentions and so forth. The first Section of this chapter introduces evidence that I have accumulated over the last many years concerning the flexibility, context-dependence, and vagueness of such common concepts. The concept engineer needs to understand the structure of (...)
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  26. Moral Reasoning in Mencius.James A. Ryan - 2003 - In Keli Fang (ed.), Chinese Philosophy and the Trends of the 21st Century Civilization. Commercial Press. pp. 151-167.
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  27. The significances of bacterial colony patterns.James A. Shapiro - 1995 - Bioessays 17 (7):597-607.
    Bacteria do many things as organized populations. We have recently learned much about the molecular basis of intercellular communication among prokaryotes. Colonies display bacterial capacities for multicellular coordination which can be useful in nature where bacteria predominantly grow as films, chains, mats and colonies. E. coli colonies are organized into differentiated non-clonal populations and undergo complex morphogenesis. Multicellularity regulates many aspects of bacterial physiology, including DNA rearrangement systems. In some bacterial species, colony development involves swarming (active migration of cell groups). (...)
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  28.  99
    The inverse conjunction fallacy.Martin Jönsson & James A. Hampton - 2006 - Journal of Memory and Language 55:317-334.
    If people believe that some property is true of all members of a class such as sofas, then they should also believe that the same property is true of all members of a conjunctively defined subset of that class such as uncomfortable handmade sofas. A series of experiments demonstrated a failure to observe this constraint, leading to what is termed the inverse conjunction fallacy. Not only did people often express a belief in the more general statement but not in the (...)
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  29. Sidgwick’s Legacy? Russell and Moore on Meaning and Philosophical Inquiry.Sébastien Gandon - 2017 - Journal for the History of Analytical Philosophy 6 (1).
    James Levine has recently argued that there is a tension between Russell’s Moorean semantical framework and Russell’s Peano-inspired analytical practice. According to Levine, this discrepancy runs deep in Russell’s thought from 1900 to 1918, and underlies many of the doctrinal changes occurring during this period. In this paper, I suggest that, contrary to what Levine claims, there is no incompatibility between Moore’s theory of meaning and the idea of informative conceptual analysis. I show this by relating Moore’s (...)
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  30. Belief States in Criminal Law.James A. Macleod - 2015 - Oklahoma Law Review 68.
    Belief-state ascription — determining what someone “knew,” “believed,” was “aware of,” etc. — is central to many areas of law. In criminal law, the distinction between knowledge and recklessness, and the use of broad jury instructions concerning other belief states, presupposes a common and stable understanding of what those belief-state terms mean. But a wealth of empirical work at the intersection of philosophy and psychology — falling under the banner of “Experimental Epistemology” — reveals how laypeople’s understandings of mens rea (...)
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  31. Isaiah in Luke.James A. Sanders - 1982 - Interpretation 36 (2):144-155.
    Luke, steeped in the Old Testament, makes clear that to understand what God was doing in Christ, one has to know Scripture; and especially the Book of Isaiah.
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  32.  78
    (1 other version)Nietzsche on Morality and the Affirmation of Life by Daniel Came (ed.). [REVIEW]James A. Mollison - 2024 - Journal of Nietzsche Studies 55 (1):110-116.
    In lieu of an abstract, here is a brief excerpt of the content:Reviewed by:Nietzsche on Morality and the Affirmation of Life ed. by Daniel CameJames A. MollisonDaniel Came, ed., Nietzsche on Morality and the Affirmation of Life Oxford: Oxford University Press, 2022. 220 pp. isbn: 978-0-198-72889-4. Hardback, $70.00Daniel Came's most recent edited collection features original essays from leading figures in the field. As most of its chapters are well-written and well-argued, it will interest Nietzsche scholars generally. It's difficult to narrow (...)
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  33. Odors: from chemical structures to gaseous plumes.Benjamin D. Young, James A. Escalon & Dennis Mathew - 2020 - Neuroscience and Biobehavioral Reviews 111:19-29.
    We are immersed within an odorous sea of chemical currents that we parse into individual odors with complex structures. Odors have been posited as determined by the structural relation between the molecules that compose the chemical compounds and their interactions with the receptor site. But, naturally occurring smells are parsed from gaseous odor plumes. To give a comprehensive account of the nature of odors the chemosciences must account for these large distributed entities as well. We offer a focused review of (...)
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  34. Revenge for Alethic Nihilism.Bradley Armour-Garb & James A. Woodbridge - 2024 - Journal of Philosophy.
    Note: The paper attached here is a "pre-review" version, not the final version that has now been published online first at the link below. -/- In “Nothing is True,” Will Gamester defends a form of alethic nihilism that still grants truth-talk a kind of legitimacy: an expressive role that is implemented via a pretense. He argues that this view has all of the strengths of deflationism, while also providing an elegant resolution of the Liar Paradox and its kin. For the (...)
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  35. The effect of relationship status on communicating emotions through touch.Erin H. Thompson & James A. Hampton - 2011 - Cognition and Emotion 25 (2):295-306.
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  36. Semantic defectiveness and the liar.Bradley Armour-Garb & James A. Woodbridge - 2013 - Philosophical Studies 164 (3):845-863.
    In this paper, we do two things. First, we provide some support for adopting a version of the meaningless strategy with respect to the liar paradox, and, second, we extend that strategy, by providing, albeit tentatively, a solution to that paradox—one that is semantic, rather than logical.
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  37. Moral grandstanding, narcissism, and self-reported responses to the COVID-19 crisis.Joshua B. Grubbs, A. Shanti James, Brandon Warmke & Justin Tosi - 2022 - Journal of Research in Personality 97 (104187):1-10.
    The present study aimed to understand how status-oriented individual differences such as narcissistic antagonism, narcissistic extraversion, and moral grandstanding motivations may have longitudinally predicted both behavioral and social media responses during the early stages of the COVID-19 pandemic. Via YouGov, a nationally representative sample of U.S. adults was recruited in August of 2019 (N = 2,519; Mage = 47.5, SD = 17.8; 51.4% women) and resampled in May of 2020, (N = 1,533). Results indicated that baseline levels of narcissistic antagonism (...)
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  38. From Mathematical Fictionalism to Truth‐Theoretic Fictionalism.Bradley Armour-Garb & James A. Woodbridge - 2014 - Philosophy and Phenomenological Research 88 (1):93-118.
    We argue that if Stephen Yablo (2005) is right that philosophers of mathematics ought to endorse a fictionalist view of number-talk, then there is a compelling reason for deflationists about truth to endorse a fictionalist view of truth-talk. More specifically, our claim will be that, for deflationists about truth, Yablo’s argument for mathematical fictionalism can be employed and mounted as an argument for truth-theoretic fictionalism.
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  39. On the origins of the contemporary notion of propositional content: anti-psychologism in nineteenth-century psychology and G.E. Moore’s early theory of judgment.Consuelo Preti - 2008 - Studies in History and Philosophy of Science Part A 39 (2):176-185.
    I argue that the familiar picture of the rise of analytic philosophy through the early work of G. E. Moore and Bertrand Russell is incomplete and to some degree erroneous. Archival evidence suggests that a considerable influence on Moore, especially evident in his 1899 paper ‘The nature of judgment,’ comes from the literature in nineteenth-century empirical psychology rather than nineteenth-century neo-Hegelianism, as is widely believed. I argue that the conceptual influences of Moore’s paper are more likely to (...)
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  40. The Story About Propositions.Bradley Armour-Garb & James A. Woodbridge - 2010 - Noûs 46 (4):635-674.
    It is our contention that an ontological commitment to propositions faces a number of problems; so many, in fact, that an attitude of realism towards propositions—understood the usual “platonistic” way, as a kind of mind- and language-independent abstract entity—is ultimately untenable. The particular worries about propositions that marshal parallel problems that Paul Benacerraf has raised for mathematical platonists. At the same time, the utility of “proposition-talk”—indeed, the apparent linguistic commitment evident in our use of 'that'-clauses (in offering explanations and making (...)
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  41.  84
    Ways of explaining properties.Daniel Heussen & James A. Hampton - 2008 - In B. C. Love, K. McRae & V. M. Sloutsky (eds.), Proceedings of the 30th Annual Conference of the Cognitive Science Society. Cognitive Science Society. pp. 143--148.
    Most explanations are either about events (why things happen), or about properties (why objects have the enduring characteristics that they do). Explanations of events have been studied extensively in philosophy and psychology, whereas the explanations of properties have received little or no attention in the literature. The present study is an exploration of the ways in which we explain various types of properties. Ten participants provided explanations of 45 properties by completing sentences of the form: “Xs have p because…” where (...)
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  42. The Ontology for Biomedical Investigations.Anita Bandrowski, Ryan Brinkman, Mathias Brochhausen, Matthew H. Brush, Bill Bug, Marcus C. Chibucos, Kevin Clancy, Mélanie Courtot, Dirk Derom, Michel Dumontier, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Frank Gibson, Alejandra Gonzalez-Beltran, Melissa A. Haendel, Yongqun He, Mervi Heiskanen, Tina Hernandez-Boussard, Mark Jensen, Yu Lin, Allyson L. Lister, Phillip Lord, James Malone, Elisabetta Manduchi, Monnie McGee, Norman Morrison, James A. Overton, Helen Parkinson, Bjoern Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Richard H. Scheuermann, Daniel Schober, Barry Smith, Larisa N. Soldatova, Christian J. Stoeckert, Chris F. Taylor, Carlo Torniai, Jessica A. Turner, Randi Vita, Patricia L. Whetzel & Jie Zheng - 2016 - PLoS ONE 11 (4):e0154556.
    The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with precisely defined meanings to describe all aspects of how investigations in the biological and medical domains are conducted. OBI re-uses ontologies that provide a representation of biomedical knowledge from the Open Biological and Biomedical Ontologies (OBO) project and adds the ability to describe how this knowledge was derived. We here describe the state of OBI and several applications that are using it, such as adding semantic expressivity to (...)
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  43. On prototypes as defaults.Martin L. Jönsson & James A. Hampton - 2006 - Cognition 106 (2):913-923.
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  44. Truthmakers, paradox and plausibility.Bradley Armour-Garb & James A. Woodbridge - 2010 - Analysis 70 (1):11-23.
    In a series of articles, Dan Lopez De Sa and Elia Zardini argue that several theorists have recently employed instances of paradoxical reasoning, while failing to see its problematic nature because it does not immediately (or obviously) yield inconsistency. In contrast, Lopez De Sa and Zardini claim that resultant inconsistency is not a necessary condition for paradoxicality. It is our contention that, even given their broader understanding of paradox, their arguments fail to undermine the instances of reasoning they attack, either (...)
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  45. Moral Grandstanding in Public Discourse: Status-Seeking Motives as a Potential Explanatory Mechanism in Predicting Conflict.Joshua B. Grubbs, Brandon Warmke, Justin Tosi, A. Shanti James & W. Keith Campbell - 2019 - PLoS ONE 14 (10).
    Public discourse is often caustic and conflict-filled. This trend seems to be particularly evident when the content of such discourse is around moral issues (broadly defined) and when the discourse occurs on social media. Several explanatory mechanisms for such conflict have been explored in recent psychological and social-science literatures. The present work sought to examine a potentially novel explanatory mechanism defined in philosophical literature: Moral Grandstanding. According to philosophical accounts, Moral Grandstanding is the use of moral talk to seek social (...)
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  46. Sellars and Pretense on "Truth & 'Correspondence'".Bradley Armour-Garb & James A. Woodbridge - 2012 - Discusiones Filosóficas 13 (21):33-63.
    In this paper, we show how an internal tension in Wilfrid Sellars’s understanding of truth, as well as an external tension in his account of meaning attribution, can be resolved while adhering to a Sellarsian spirit, by appealing to the particular fictionalist accounts of truth-talk and proposition-talk that we have developed elsewhere.
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  47. Moral grandstanding and political polarization: A multi-study consideration.Joshua B. Grubbs, Brandon Warmke, Justin Tosi & A. Shanti James - 2020 - Journal of Research in Personality 88.
    The present work posits that social motives, particularly status seeking in the form of moral grandstanding, are likely at least partially to blame for elevated levels of affective polarization and ideological extremism in the U.S. In Study 1, results from both undergraduates (N = 981; Mean age = 19.4; SD = 2.1; 69.7% women) and a cross-section of U.S. adults matched to 2010 census norms (N = 1,063; Mean age = 48.20, SD = 16.38; 49.8% women) indicated that prestige-motived grandstanding (...)
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  48. A Moorean Defense of the Omnivore?Tristram McPherson - 2015 - In Ben Bramble & Bob Fischer (eds.), The Moral Complexities of Eating Meat. New York, US: Oxford University Press. pp. 118-134.
    Philosophers have offered several apparently powerful arguments against the permissibility of eating meat. However, the idea that it is okay to eat meat can seem like a bit of ethical common sense. This paper examines the attempt to adapt one of the most influential philosophical defenses of common sense –G. E. Moore’s case against the skeptic andthe idealist –in support of the omnivore. I first introduce and explain Moore’s argument against the skeptic. I then explain how that argument (...)
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  49. Developing the Quantitative Histopathology Image Ontology : A case study using the hot spot detection problem.Metin Gurcan, Tomaszewski N., Overton John, A. James, Scott Doyle, Alan Ruttenberg & Barry Smith - 2017 - Journal of Biomedical Informatics 66:129-135.
    Interoperability across data sets is a key challenge for quantitative histopathological imaging. There is a need for an ontology that can support effective merging of pathological image data with associated clinical and demographic data. To foster organized, cross-disciplinary, information-driven collaborations in the pathological imaging field, we propose to develop an ontology to represent imaging data and methods used in pathological imaging and analysis, and call it Quantitative Histopathological Imaging Ontology – QHIO. We apply QHIO to breast cancer hot-spot detection with (...)
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  50. OBO Foundry in 2021: Operationalizing Open Data Principles to Evaluate Ontologies.Rebecca C. Jackson, Nicolas Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg, Seth Carbon, Melanie Courtot, Alexander D. Diehl, Damion Dooley, William Duncan, Nomi L. Harris, Melissa A. Haendel, Suzanna E. Lewis, Darren A. Natale, David Osumi-Sutherland, Alan Ruttenberg, Lynn M. Schriml, Barry Smith, Christian J. Stoeckert, Nicole A. Vasilevsky, Ramona L. Walls, Jie Zheng, Christopher J. Mungall & Bjoern Peters - 2021 - BioaRxiv.
    Biological ontologies are used to organize, curate, and interpret the vast quantities of data arising from biological experiments. While this works well when using a single ontology, integrating multiple ontologies can be problematic, as they are developed independently, which can lead to incompatibilities. The Open Biological and Biomedical Ontologies Foundry was created to address this by facilitating the development, harmonization, application, and sharing of ontologies, guided by a set of overarching principles. One challenge in reaching these goals was that the (...)
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